This used to really bother me too, until I did a bit of research on the chemistry involved and gave it some thought.  I use a python on my 150g tank--it's in a business, and I do big water changes to keep the organics under control, and having several dozen gallons of water lying around for several days isn't an option.  I add enough water conditioner to treat the whole tank, not just the water being added--that's important.  I also have the filter running.  So, the water conditioner gets circulated through the whole water column, and the chlorine/chloramine gets instantly nuked as it contacts the aquarium water.  I doubt the fish ever get a whiff of it, and it's certainly neutralized before it gets into the filter or the substrate.  No problem.
Anyway, my angelfish have not embarked on a campaign of militarization (at least not anymore than what you'd expect from a school of angelfish), nor have they set up any concentration camps to try to exterminate the tetras, so I guess we're doing OK.