Difficult one. How long had your carbon been in the tank before you added medicine? its usually said that carbon is only useful for anywhere from 4-8 weeks (depending on article) before its adsorption properties are used up. When removing medication I usually use new carbon and leave it in the filter for 2-3 days (some people say you only need 24 hours) before removing it and throwing it away.
I would say to be safe remove the carbon and re-dose again as per the instructions on the medication in 4 days as you will have no idea how much the carbon has removed, it may have removed all, half or none at all, it is a little difficult to say.